public static class GVFVariant.BreakpointDetail extends BaseIdentifiableElement implements IResourceBlock
Definition: Coordinate of a variant with zero length
Constructor and Description |
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BreakpointDetail() |
Modifier and Type | Method and Description |
---|---|
<T extends IElement> |
getAllPopulatedChildElementsOfType(Class<T> theType) |
IntegerDt |
getEnd()
Gets the value(s) for end (End position).
|
IntegerDt |
getEndElement()
Gets the value(s) for end (End position).
|
StringDt |
getSeqid()
Gets the value(s) for seqid (Sequence Id of the variant).
|
StringDt |
getSeqidElement()
Gets the value(s) for seqid (Sequence Id of the variant).
|
IntegerDt |
getStart()
Gets the value(s) for start (Start position).
|
IntegerDt |
getStartElement()
Gets the value(s) for start (Start position).
|
CodeDt |
getStrand()
Gets the value(s) for strand (Strand).
|
CodeDt |
getStrandElement()
Gets the value(s) for strand (Strand).
|
boolean |
isEmpty() |
GVFVariant.BreakpointDetail |
setEnd(int theInteger)
Sets the value for end (End position)
|
GVFVariant.BreakpointDetail |
setEnd(IntegerDt theValue)
Sets the value(s) for end (End position)
|
GVFVariant.BreakpointDetail |
setSeqid(String theString)
Sets the value for seqid (Sequence Id of the variant)
|
GVFVariant.BreakpointDetail |
setSeqid(StringDt theValue)
Sets the value(s) for seqid (Sequence Id of the variant)
|
GVFVariant.BreakpointDetail |
setStart(int theInteger)
Sets the value for start (Start position)
|
GVFVariant.BreakpointDetail |
setStart(IntegerDt theValue)
Sets the value(s) for start (Start position)
|
GVFVariant.BreakpointDetail |
setStrand(CodeDt theValue)
Sets the value(s) for strand (Strand)
|
GVFVariant.BreakpointDetail |
setStrand(String theCode)
Sets the value for strand (Strand)
|
getElementSpecificId, getId, setElementSpecificId, setId, setId
addUndeclaredExtension, addUndeclaredExtension, addUndeclaredExtension, getAllUndeclaredExtensions, getFormatCommentsPost, getFormatCommentsPre, getUndeclaredExtensions, getUndeclaredExtensionsByUrl, getUndeclaredModifierExtensions, hasFormatComment, isBaseEmpty
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
getElementSpecificId, getId, setElementSpecificId, setId, setId
getFormatCommentsPost, getFormatCommentsPre, hasFormatComment
public <T extends IElement> List<T> getAllPopulatedChildElementsOfType(Class<T> theType)
getAllPopulatedChildElementsOfType
in interface ICompositeElement
public StringDt getSeqid()
null
.
Definition: Sequence Id of the variant
public StringDt getSeqidElement()
null
.
Definition: Sequence Id of the variant
public GVFVariant.BreakpointDetail setSeqid(StringDt theValue)
Definition: Sequence Id of the variant
public GVFVariant.BreakpointDetail setSeqid(String theString)
Definition: Sequence Id of the variant
public IntegerDt getStart()
null
.
Definition: Start position
public IntegerDt getStartElement()
null
.
Definition: Start position
public GVFVariant.BreakpointDetail setStart(IntegerDt theValue)
Definition: Start position
public GVFVariant.BreakpointDetail setStart(int theInteger)
Definition: Start position
public IntegerDt getEnd()
null
.
Definition: End position
public IntegerDt getEndElement()
null
.
Definition: End position
public GVFVariant.BreakpointDetail setEnd(IntegerDt theValue)
Definition: End position
public GVFVariant.BreakpointDetail setEnd(int theInteger)
Definition: End position
public CodeDt getStrand()
null
.
Definition: Direction of strand
public CodeDt getStrandElement()
null
.
Definition: Direction of strand
public GVFVariant.BreakpointDetail setStrand(CodeDt theValue)
Definition: Direction of strand
public GVFVariant.BreakpointDetail setStrand(String theCode)
Definition: Direction of strand
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