001package org.hl7.fhir.convertors.loaders.loaderR5;
002
003import java.io.IOException;
004import java.io.InputStream;
005import java.util.ArrayList;
006import java.util.List;
007import java.util.UUID;
008
009/*
010  Copyright (c) 2011+, HL7, Inc.
011  All rights reserved.
012  
013  Redistribution and use in source and binary forms, with or without modification, 
014  are permitted provided that the following conditions are met:
015    
016   * Redistributions of source code must retain the above copyright notice, this 
017     list of conditions and the following disclaimer.
018   * Redistributions in binary form must reproduce the above copyright notice, 
019     this list of conditions and the following disclaimer in the documentation 
020     and/or other materials provided with the distribution.
021   * Neither the name of HL7 nor the names of its contributors may be used to 
022     endorse or promote products derived from this software without specific 
023     prior written permission.
024  
025  THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND 
026  ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED 
027  WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. 
028  IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, 
029  INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT 
030  NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR 
031  PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, 
032  WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) 
033  ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE 
034  POSSIBILITY OF SUCH DAMAGE.
035  
036 */
037
038
039import org.hl7.fhir.convertors.advisors.impl.BaseAdvisor_40_50;
040import org.hl7.fhir.convertors.factory.VersionConvertorFactory_40_50;
041import org.hl7.fhir.convertors.txClient.TerminologyClientFactory;
042import org.hl7.fhir.exceptions.FHIRException;
043import org.hl7.fhir.r4.formats.JsonParser;
044import org.hl7.fhir.r4.formats.XmlParser;
045import org.hl7.fhir.r4.model.Resource;
046import org.hl7.fhir.r5.conformance.StructureDefinitionHacker;
047import org.hl7.fhir.r5.context.IContextResourceLoader;
048import org.hl7.fhir.r5.model.Bundle;
049import org.hl7.fhir.r5.model.Bundle.BundleEntryComponent;
050import org.hl7.fhir.r5.model.Bundle.BundleType;
051import org.hl7.fhir.r5.model.CanonicalResource;
052import org.hl7.fhir.r5.model.CodeSystem;
053import org.hl7.fhir.r5.model.StructureDefinition;
054import org.hl7.fhir.r5.model.StructureDefinition.StructureDefinitionKind;
055import org.hl7.fhir.r5.terminologies.client.TerminologyClientManager.ITerminologyClientFactory;
056import org.hl7.fhir.utilities.VersionUtilities;
057
058public class R4ToR5Loader extends BaseLoaderR5 implements IContextResourceLoader {
059
060  private final BaseAdvisor_40_50 advisor = new BaseAdvisor_40_50();
061  private String version;
062
063  public R4ToR5Loader(List<String> types, ILoaderKnowledgeProviderR5 lkp, String version) { // might be 4B
064    super(types, lkp);
065    this.version = version;
066  }
067
068  @Override
069  public Bundle loadBundle(InputStream stream, boolean isJson) throws FHIRException, IOException {
070    Resource r4 = null;
071    if (isJson)
072      r4 = new JsonParser().parse(stream);
073    else
074      r4 = new XmlParser().parse(stream);
075    org.hl7.fhir.r5.model.Resource r5 = VersionConvertorFactory_40_50.convertResource(r4, advisor);
076
077    Bundle b;
078    if (r5 instanceof Bundle)
079      b = (Bundle) r5;
080    else {
081      b = new Bundle();
082      b.setId(UUID.randomUUID().toString().toLowerCase());
083      b.setType(BundleType.COLLECTION);
084      b.addEntry().setResource(r5).setFullUrl(r5 instanceof CanonicalResource ? ((CanonicalResource) r5).getUrl() : null);
085    }
086    for (CodeSystem cs : advisor.getCslist()) {
087      BundleEntryComponent be = b.addEntry();
088      be.setFullUrl(cs.getUrl());
089      be.setResource(cs);
090    }
091    if (killPrimitives) {
092      List<BundleEntryComponent> remove = new ArrayList<BundleEntryComponent>();
093      for (BundleEntryComponent be : b.getEntry()) {
094        if (be.hasResource() && be.getResource() instanceof StructureDefinition) {
095          StructureDefinition sd = (StructureDefinition) be.getResource();
096          if (sd.getKind() == StructureDefinitionKind.PRIMITIVETYPE)
097            remove.add(be);
098        }
099      }
100      b.getEntry().removeAll(remove);
101    }
102    if (patchUrls) {
103      for (BundleEntryComponent be : b.getEntry()) {
104        if (be.hasResource()) {
105          doPatchUrls(be.getResource());
106        }
107      }
108    }
109    return b;
110  }
111
112  @Override
113  public org.hl7.fhir.r5.model.Resource loadResource(InputStream stream, boolean isJson) throws FHIRException, IOException {
114    Resource r4 = null;
115    if (isJson)
116      r4 = new JsonParser().parse(stream);
117    else
118      r4 = new XmlParser().parse(stream);
119    org.hl7.fhir.r5.model.Resource r5 = VersionConvertorFactory_40_50.convertResource(r4);
120    setPath(r5);
121
122    if (!advisor.getCslist().isEmpty()) {
123      throw new FHIRException("Error: Cannot have included code systems");
124    }
125    if (killPrimitives) {
126      throw new FHIRException("Cannot kill primitives when using deferred loading");
127    }
128    if (r5 instanceof StructureDefinition) {
129      r5 = new StructureDefinitionHacker(version).fixSD((StructureDefinition) r5);
130    }
131    if (patchUrls) {
132      doPatchUrls(r5);
133    }
134    return r5;
135  }
136
137  
138  @Override
139  public List<CodeSystem> getCodeSystems() {
140    return new ArrayList<>();
141  }
142
143  @Override
144  protected String versionString() {
145    return "4.0";
146  }
147
148
149  @Override
150  public ITerminologyClientFactory txFactory() {
151    return new TerminologyClientFactory(versionString());
152  }
153
154}