001
002package ca.uhn.fhir.jpa.rp.dstu2;
003
004import java.util.*;
005
006import org.apache.commons.lang3.StringUtils;
007
008import ca.uhn.fhir.jpa.provider.*;
009import ca.uhn.fhir.jpa.searchparam.SearchParameterMap;
010import ca.uhn.fhir.model.api.Include;
011import ca.uhn.fhir.model.api.annotation.*;
012import ca.uhn.fhir.model.dstu2.composite.*;
013import ca.uhn.fhir.model.dstu2.resource.*; //
014import ca.uhn.fhir.rest.annotation.*;
015import ca.uhn.fhir.rest.param.*;
016import ca.uhn.fhir.rest.api.SortSpec;
017import ca.uhn.fhir.rest.api.SummaryEnum;
018import ca.uhn.fhir.rest.api.SearchTotalModeEnum;
019import ca.uhn.fhir.rest.api.SearchContainedModeEnum;
020
021public class SpecimenResourceProvider extends 
022        JpaResourceProviderDstu2<Specimen>
023        {
024
025        @Override
026        public Class<Specimen> getResourceType() {
027                return Specimen.class;
028        }
029
030        @Search(allowUnknownParams=true)
031        public ca.uhn.fhir.rest.api.server.IBundleProvider search(
032                        javax.servlet.http.HttpServletRequest theServletRequest,
033                        javax.servlet.http.HttpServletResponse theServletResponse,
034
035                        ca.uhn.fhir.rest.api.server.RequestDetails theRequestDetails,
036
037                        @Description(shortDefinition="Search the contents of the resource's data using a filter")
038                        @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_FILTER)
039                        StringAndListParam theFtFilter,
040
041                        @Description(shortDefinition="Search the contents of the resource's data using a fulltext search")
042                        @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_CONTENT)
043                        StringAndListParam theFtContent, 
044
045                        @Description(shortDefinition="Search the contents of the resource's narrative using a fulltext search")
046                        @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_TEXT)
047                        StringAndListParam theFtText, 
048
049                        @Description(shortDefinition="Search for resources which have the given tag")
050                        @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_TAG)
051                        TokenAndListParam theSearchForTag, 
052
053                        @Description(shortDefinition="Search for resources which have the given security labels")
054                        @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_SECURITY)
055                        TokenAndListParam theSearchForSecurity, 
056  
057                        @Description(shortDefinition="Search for resources which have the given profile")
058                        @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_PROFILE)
059                        UriAndListParam theSearchForProfile,
060
061                        @Description(shortDefinition="Search for resources which have the given source value (Resource.meta.source)")
062                        @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_SOURCE)
063                        UriAndListParam theSearchForSource,
064
065                        @Description(shortDefinition="Return resources linked to by the given target")
066                        @OptionalParam(name="_has")
067                        HasAndListParam theHas, 
068
069   
070
071                        @Description(shortDefinition="The ID of the resource")
072                        @OptionalParam(name="_id")
073                        StringAndListParam the_id, 
074   
075
076                        @Description(shortDefinition="The accession number associated with the specimen")
077                        @OptionalParam(name="accession")
078                        TokenAndListParam theAccession,
079   
080
081                        @Description(shortDefinition="The code for the body site from where the specimen originated")
082                        @OptionalParam(name="bodysite")
083                        TokenAndListParam theBodysite,
084   
085
086                        @Description(shortDefinition="The date the specimen was collected")
087                        @OptionalParam(name="collected")
088                        DateRangeParam theCollected, 
089   
090
091                        @Description(shortDefinition="Who collected the specimen")
092                        @OptionalParam(name="collector", targetTypes={  } )
093                        ReferenceAndListParam theCollector, 
094   
095
096                        @Description(shortDefinition="The kind of specimen container")
097                        @OptionalParam(name="container")
098                        TokenAndListParam theContainer,
099   
100
101                        @Description(shortDefinition="The unique identifier associated with the specimen container")
102                        @OptionalParam(name="container-id")
103                        TokenAndListParam theContainer_id,
104   
105
106                        @Description(shortDefinition="The unique identifier associated with the specimen")
107                        @OptionalParam(name="identifier")
108                        TokenAndListParam theIdentifier,
109   
110
111                        @Description(shortDefinition="The parent of the specimen")
112                        @OptionalParam(name="parent", targetTypes={  } )
113                        ReferenceAndListParam theParent, 
114   
115
116                        @Description(shortDefinition="The patient the specimen comes from")
117                        @OptionalParam(name="patient", targetTypes={  } )
118                        ReferenceAndListParam thePatient, 
119   
120
121                        @Description(shortDefinition="The subject of the specimen")
122                        @OptionalParam(name="subject", targetTypes={  } )
123                        ReferenceAndListParam theSubject, 
124   
125
126                        @Description(shortDefinition="The specimen type")
127                        @OptionalParam(name="type")
128                        TokenAndListParam theType,
129
130                        @RawParam
131                        Map<String, List<String>> theAdditionalRawParams,
132
133                        @Description(shortDefinition="Only return resources which were last updated as specified by the given range")
134                        @OptionalParam(name="_lastUpdated")
135                        DateRangeParam theLastUpdated, 
136
137                        @IncludeParam
138                        Set<Include> theIncludes,
139
140                        @IncludeParam(reverse=true)
141                        Set<Include> theRevIncludes,
142
143                        @Sort
144                        SortSpec theSort,
145                        
146                        @ca.uhn.fhir.rest.annotation.Count
147                        Integer theCount,
148
149                        @ca.uhn.fhir.rest.annotation.Offset
150                        Integer theOffset,
151
152                        SummaryEnum theSummaryMode,
153
154                        SearchTotalModeEnum theSearchTotalMode,
155
156                        SearchContainedModeEnum theSearchContainedMode
157
158                        ) {
159                startRequest(theServletRequest);
160                try {
161                        SearchParameterMap paramMap = new SearchParameterMap();
162                        paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_FILTER, theFtFilter);
163                        paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_CONTENT, theFtContent);
164                        paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_TEXT, theFtText);
165                        paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_TAG, theSearchForTag);
166                        paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_SECURITY, theSearchForSecurity);
167                        paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_PROFILE, theSearchForProfile);
168                        paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_SOURCE, theSearchForSource);
169                        paramMap.add("_has", theHas);
170                        paramMap.add("_id", the_id);
171                        paramMap.add("accession", theAccession);
172                        paramMap.add("bodysite", theBodysite);
173                        paramMap.add("collected", theCollected);
174                        paramMap.add("collector", theCollector);
175                        paramMap.add("container", theContainer);
176                        paramMap.add("container-id", theContainer_id);
177                        paramMap.add("identifier", theIdentifier);
178                        paramMap.add("parent", theParent);
179                        paramMap.add("patient", thePatient);
180                        paramMap.add("subject", theSubject);
181                        paramMap.add("type", theType);
182                        paramMap.setRevIncludes(theRevIncludes);
183                        paramMap.setLastUpdated(theLastUpdated);
184                        paramMap.setIncludes(theIncludes);
185                        paramMap.setSort(theSort);
186                        paramMap.setCount(theCount);
187                        paramMap.setOffset(theOffset);
188                        paramMap.setSummaryMode(theSummaryMode);
189                        paramMap.setSearchTotalMode(theSearchTotalMode);
190                        paramMap.setSearchContainedMode(theSearchContainedMode);
191
192                        getDao().translateRawParameters(theAdditionalRawParams, paramMap);
193
194                        ca.uhn.fhir.rest.api.server.IBundleProvider retVal = getDao().search(paramMap, theRequestDetails, theServletResponse);
195                        return retVal;
196                } finally {
197                        endRequest(theServletRequest);
198                }
199        }
200
201}