001 002package ca.uhn.fhir.jpa.rp.r5; 003 004import java.util.*; 005 006import org.apache.commons.lang3.StringUtils; 007 008import ca.uhn.fhir.jpa.searchparam.SearchParameterMap; 009import ca.uhn.fhir.model.api.Include; 010import ca.uhn.fhir.model.api.annotation.*; 011import org.hl7.fhir.r5.model.*; 012import ca.uhn.fhir.rest.annotation.*; 013import ca.uhn.fhir.rest.param.*; 014import ca.uhn.fhir.rest.api.SortSpec; 015import ca.uhn.fhir.rest.api.SummaryEnum; 016import ca.uhn.fhir.rest.api.SearchTotalModeEnum; 017import ca.uhn.fhir.rest.api.SearchContainedModeEnum; 018 019public class SpecimenDefinitionResourceProvider extends 020 ca.uhn.fhir.jpa.provider.BaseJpaResourceProvider<SpecimenDefinition> 021 { 022 023 @Override 024 public Class<SpecimenDefinition> getResourceType() { 025 return SpecimenDefinition.class; 026 } 027 028 @Search(allowUnknownParams=true) 029 public ca.uhn.fhir.rest.api.server.IBundleProvider search( 030 jakarta.servlet.http.HttpServletRequest theServletRequest, 031 jakarta.servlet.http.HttpServletResponse theServletResponse, 032 033 ca.uhn.fhir.rest.api.server.RequestDetails theRequestDetails, 034 035 @Description(shortDefinition="Search the contents of the resource's data using a filter") 036 @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_FILTER) 037 StringAndListParam theFtFilter, 038 039 @Description(shortDefinition="Search the contents of the resource's data using a fulltext search") 040 @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_CONTENT) 041 StringAndListParam theFtContent, 042 043 @Description(shortDefinition="Search the contents of the resource's narrative using a fulltext search") 044 @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_TEXT) 045 StringAndListParam theFtText, 046 047 @Description(shortDefinition="Search for resources which have the given tag") 048 @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_TAG) 049 TokenAndListParam theSearchForTag, 050 051 @Description(shortDefinition="Search for resources which have the given security labels") 052 @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_SECURITY) 053 TokenAndListParam theSearchForSecurity, 054 055 @Description(shortDefinition="Search for resources which have the given profile") 056 @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_PROFILE) 057 UriAndListParam theSearchForProfile, 058 059 @Description(shortDefinition="Search the contents of the resource's data using a list") 060 @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_LIST) 061 StringAndListParam theList, 062 063 064 @Description(shortDefinition="Search for resources which have the given source value (Resource.meta.source)") 065 @OptionalParam(name=ca.uhn.fhir.rest.api.Constants.PARAM_SOURCE) 066 UriAndListParam theSearchForSource, 067 068 @Description(shortDefinition="Return resources linked to by the given target") 069 @OptionalParam(name="_has") 070 HasAndListParam theHas, 071 072 073 074 @Description(shortDefinition="The ID of the resource") 075 @OptionalParam(name="_id") 076 TokenAndListParam the_id, 077 078 079 @Description(shortDefinition="Search on the narrative of the resource") 080 @OptionalParam(name="_text") 081 SpecialAndListParam the_text, 082 083 084 @Description(shortDefinition="The type of specimen conditioned in container expected by the lab") 085 @OptionalParam(name="container") 086 TokenAndListParam theContainer, 087 088 089 @Description(shortDefinition="Not for genuine usage (true)") 090 @OptionalParam(name="experimental") 091 TokenAndListParam theExperimental, 092 093 094 @Description(shortDefinition="Multiple Resources: * [ActivityDefinition](activitydefinition.html): External identifier for the activity definition* [ActorDefinition](actordefinition.html): External identifier for the Actor Definition* [CapabilityStatement](capabilitystatement.html): External identifier for the capability statement* [ChargeItemDefinition](chargeitemdefinition.html): External identifier for the charge item definition* [Citation](citation.html): External identifier for the citation* [CodeSystem](codesystem.html): External identifier for the code system* [ConceptMap](conceptmap.html): External identifier for the concept map* [ConditionDefinition](conditiondefinition.html): External identifier for the condition definition* [EventDefinition](eventdefinition.html): External identifier for the event definition* [Evidence](evidence.html): External identifier for the evidence* [EvidenceReport](evidencereport.html): External identifier for the evidence report* [EvidenceVariable](evidencevariable.html): External identifier for the evidence variable* [ExampleScenario](examplescenario.html): External identifier for the example scenario* [GraphDefinition](graphdefinition.html): External identifier for the graph definition* [ImplementationGuide](implementationguide.html): External identifier for the implementation guide* [Library](library.html): External identifier for the library* [Measure](measure.html): External identifier for the measure* [MedicationKnowledge](medicationknowledge.html): Business identifier for this medication* [MessageDefinition](messagedefinition.html): External identifier for the message definition* [NamingSystem](namingsystem.html): External identifier for the naming system* [ObservationDefinition](observationdefinition.html): The unique identifier associated with the specimen definition* [OperationDefinition](operationdefinition.html): External identifier for the search parameter* [PlanDefinition](plandefinition.html): External identifier for the plan definition* [Questionnaire](questionnaire.html): External identifier for the questionnaire* [Requirements](requirements.html): External identifier for the requirements* [SearchParameter](searchparameter.html): External identifier for the search parameter* [SpecimenDefinition](specimendefinition.html): The unique identifier associated with the SpecimenDefinition* [StructureDefinition](structuredefinition.html): External identifier for the structure definition* [StructureMap](structuremap.html): External identifier for the structure map* [SubscriptionTopic](subscriptiontopic.html): Business Identifier for SubscriptionTopic* [TerminologyCapabilities](terminologycapabilities.html): External identifier for the terminology capabilities* [TestPlan](testplan.html): An identifier for the test plan* [TestScript](testscript.html): External identifier for the test script* [ValueSet](valueset.html): External identifier for the value set") 095 @OptionalParam(name="identifier") 096 TokenAndListParam theIdentifier, 097 098 099 @Description(shortDefinition="Primary specimen (false) or derived specimen (true)") 100 @OptionalParam(name="is-derived") 101 TokenAndListParam theIs_derived, 102 103 104 @Description(shortDefinition="Multiple Resources: * [ActivityDefinition](activitydefinition.html): The current status of the activity definition* [ActorDefinition](actordefinition.html): The current status of the Actor Definition* [CapabilityStatement](capabilitystatement.html): The current status of the capability statement* [ChargeItemDefinition](chargeitemdefinition.html): The current status of the charge item definition* [Citation](citation.html): The current status of the citation* [CodeSystem](codesystem.html): The current status of the code system* [CompartmentDefinition](compartmentdefinition.html): The current status of the compartment definition* [ConceptMap](conceptmap.html): The current status of the concept map* [ConditionDefinition](conditiondefinition.html): The current status of the condition definition* [EventDefinition](eventdefinition.html): The current status of the event definition* [Evidence](evidence.html): The current status of the evidence* [EvidenceReport](evidencereport.html): The current status of the evidence report* [EvidenceVariable](evidencevariable.html): The current status of the evidence variable* [ExampleScenario](examplescenario.html): The current status of the example scenario* [GraphDefinition](graphdefinition.html): The current status of the graph definition* [ImplementationGuide](implementationguide.html): The current status of the implementation guide* [Library](library.html): The current status of the library* [Measure](measure.html): The current status of the measure* [MedicationKnowledge](medicationknowledge.html): active | inactive | entered-in-error* [MessageDefinition](messagedefinition.html): The current status of the message definition* [NamingSystem](namingsystem.html): The current status of the naming system* [ObservationDefinition](observationdefinition.html): Publication status of the ObservationDefinition: draft, active, retired, unknown* [OperationDefinition](operationdefinition.html): The current status of the operation definition* [PlanDefinition](plandefinition.html): The current status of the plan definition* [Questionnaire](questionnaire.html): The current status of the questionnaire* [Requirements](requirements.html): The current status of the requirements* [SearchParameter](searchparameter.html): The current status of the search parameter* [SpecimenDefinition](specimendefinition.html): Publication status of the SpecimenDefinition: draft, active, retired, unknown* [StructureDefinition](structuredefinition.html): The current status of the structure definition* [StructureMap](structuremap.html): The current status of the structure map* [SubscriptionTopic](subscriptiontopic.html): draft | active | retired | unknown* [TerminologyCapabilities](terminologycapabilities.html): The current status of the terminology capabilities* [TestPlan](testplan.html): The current status of the test plan* [TestScript](testscript.html): The current status of the test script* [ValueSet](valueset.html): The current status of the value set") 105 @OptionalParam(name="status") 106 TokenAndListParam theStatus, 107 108 109 @Description(shortDefinition="Multiple Resources: * [ActivityDefinition](activitydefinition.html): The human-friendly name of the activity definition* [ActorDefinition](actordefinition.html): The human-friendly name of the Actor Definition* [CapabilityStatement](capabilitystatement.html): The human-friendly name of the capability statement* [ChargeItemDefinition](chargeitemdefinition.html): The human-friendly name of the charge item definition* [Citation](citation.html): The human-friendly name of the citation* [CodeSystem](codesystem.html): The human-friendly name of the code system* [ConceptMap](conceptmap.html): The human-friendly name of the concept map* [ConditionDefinition](conditiondefinition.html): The human-friendly name of the condition definition* [EventDefinition](eventdefinition.html): The human-friendly name of the event definition* [Evidence](evidence.html): The human-friendly name of the evidence* [EvidenceVariable](evidencevariable.html): The human-friendly name of the evidence variable* [ImplementationGuide](implementationguide.html): The human-friendly name of the implementation guide* [Library](library.html): The human-friendly name of the library* [Measure](measure.html): The human-friendly name of the measure* [MessageDefinition](messagedefinition.html): The human-friendly name of the message definition* [ObservationDefinition](observationdefinition.html): Human-friendly name of the ObservationDefinition* [OperationDefinition](operationdefinition.html): The human-friendly name of the operation definition* [PlanDefinition](plandefinition.html): The human-friendly name of the plan definition* [Questionnaire](questionnaire.html): The human-friendly name of the questionnaire* [Requirements](requirements.html): The human-friendly name of the requirements* [SpecimenDefinition](specimendefinition.html): Human-friendly name of the SpecimenDefinition* [StructureDefinition](structuredefinition.html): The human-friendly name of the structure definition* [StructureMap](structuremap.html): The human-friendly name of the structure map* [SubscriptionTopic](subscriptiontopic.html): Name for this SubscriptionTopic (Human friendly)* [TerminologyCapabilities](terminologycapabilities.html): The human-friendly name of the terminology capabilities* [TestScript](testscript.html): The human-friendly name of the test script* [ValueSet](valueset.html): The human-friendly name of the value set") 110 @OptionalParam(name="title") 111 StringAndListParam theTitle, 112 113 114 @Description(shortDefinition="The type of collected specimen") 115 @OptionalParam(name="type") 116 TokenAndListParam theType, 117 118 119 @Description(shortDefinition="The type of specimen conditioned for testing") 120 @OptionalParam(name="type-tested") 121 TokenAndListParam theType_tested, 122 123 124 @Description(shortDefinition="Multiple Resources: * [ActivityDefinition](activitydefinition.html): The uri that identifies the activity definition* [ActorDefinition](actordefinition.html): The uri that identifies the Actor Definition* [CapabilityStatement](capabilitystatement.html): The uri that identifies the capability statement* [ChargeItemDefinition](chargeitemdefinition.html): The uri that identifies the charge item definition* [Citation](citation.html): The uri that identifies the citation* [CodeSystem](codesystem.html): The uri that identifies the code system* [CompartmentDefinition](compartmentdefinition.html): The uri that identifies the compartment definition* [ConceptMap](conceptmap.html): The URI that identifies the concept map* [ConditionDefinition](conditiondefinition.html): The uri that identifies the condition definition* [EventDefinition](eventdefinition.html): The uri that identifies the event definition* [Evidence](evidence.html): The uri that identifies the evidence* [EvidenceReport](evidencereport.html): The uri that identifies the evidence report* [EvidenceVariable](evidencevariable.html): The uri that identifies the evidence variable* [ExampleScenario](examplescenario.html): The uri that identifies the example scenario* [GraphDefinition](graphdefinition.html): The uri that identifies the graph definition* [ImplementationGuide](implementationguide.html): The uri that identifies the implementation guide* [Library](library.html): The uri that identifies the library* [Measure](measure.html): The uri that identifies the measure* [MessageDefinition](messagedefinition.html): The uri that identifies the message definition* [NamingSystem](namingsystem.html): The uri that identifies the naming system* [ObservationDefinition](observationdefinition.html): The uri that identifies the observation definition* [OperationDefinition](operationdefinition.html): The uri that identifies the operation definition* [PlanDefinition](plandefinition.html): The uri that identifies the plan definition* [Questionnaire](questionnaire.html): The uri that identifies the questionnaire* [Requirements](requirements.html): The uri that identifies the requirements* [SearchParameter](searchparameter.html): The uri that identifies the search parameter* [SpecimenDefinition](specimendefinition.html): The uri that identifies the specimen definition* [StructureDefinition](structuredefinition.html): The uri that identifies the structure definition* [StructureMap](structuremap.html): The uri that identifies the structure map* [SubscriptionTopic](subscriptiontopic.html): Logical canonical URL to reference this SubscriptionTopic (globally unique)* [TerminologyCapabilities](terminologycapabilities.html): The uri that identifies the terminology capabilities* [TestPlan](testplan.html): The uri that identifies the test plan* [TestScript](testscript.html): The uri that identifies the test script* [ValueSet](valueset.html): The uri that identifies the value set") 125 @OptionalParam(name="url") 126 UriAndListParam theUrl, 127 128 @RawParam 129 Map<String, List<String>> theAdditionalRawParams, 130 131 @Description(shortDefinition="Only return resources which were last updated as specified by the given range") 132 @OptionalParam(name="_lastUpdated") 133 DateRangeParam theLastUpdated, 134 135 @IncludeParam 136 Set<Include> theIncludes, 137 138 @IncludeParam(reverse=true) 139 Set<Include> theRevIncludes, 140 141 @Sort 142 SortSpec theSort, 143 144 @ca.uhn.fhir.rest.annotation.Count 145 Integer theCount, 146 147 @ca.uhn.fhir.rest.annotation.Offset 148 Integer theOffset, 149 150 SummaryEnum theSummaryMode, 151 152 SearchTotalModeEnum theSearchTotalMode, 153 154 SearchContainedModeEnum theSearchContainedMode 155 156 ) { 157 startRequest(theServletRequest); 158 try { 159 SearchParameterMap paramMap = new SearchParameterMap(); 160 paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_FILTER, theFtFilter); 161 paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_CONTENT, theFtContent); 162 paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_TEXT, theFtText); 163 paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_TAG, theSearchForTag); 164 paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_SECURITY, theSearchForSecurity); 165 paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_PROFILE, theSearchForProfile); 166 paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_SOURCE, theSearchForSource); 167 paramMap.add(ca.uhn.fhir.rest.api.Constants.PARAM_LIST, theList); 168 paramMap.add("_has", theHas); 169 paramMap.add("_id", the_id); 170 paramMap.add("_text", the_text); 171 paramMap.add("container", theContainer); 172 paramMap.add("experimental", theExperimental); 173 paramMap.add("identifier", theIdentifier); 174 paramMap.add("is-derived", theIs_derived); 175 paramMap.add("status", theStatus); 176 paramMap.add("title", theTitle); 177 paramMap.add("type", theType); 178 paramMap.add("type-tested", theType_tested); 179 paramMap.add("url", theUrl); 180 paramMap.setRevIncludes(theRevIncludes); 181 paramMap.setLastUpdated(theLastUpdated); 182 paramMap.setIncludes(theIncludes); 183 paramMap.setSort(theSort); 184 paramMap.setCount(theCount); 185 paramMap.setOffset(theOffset); 186 paramMap.setSummaryMode(theSummaryMode); 187 paramMap.setSearchTotalMode(theSearchTotalMode); 188 paramMap.setSearchContainedMode(theSearchContainedMode); 189 190 getDao().translateRawParameters(theAdditionalRawParams, paramMap); 191 192 ca.uhn.fhir.rest.api.server.IBundleProvider retVal = getDao().search(paramMap, theRequestDetails, theServletResponse); 193 return retVal; 194 } finally { 195 endRequest(theServletRequest); 196 } 197 } 198 199}