Package org.hl7.fhir.r4.model

Class MolecularSequence.MolecularSequenceStructureVariantComponent

java.lang.Object

org.hl7.fhir.r4.model.Base

org.hl7.fhir.r4.model.Element

org.hl7.fhir.r4.model.BackboneElement

org.hl7.fhir.r4.model.MolecularSequence.MolecularSequenceStructureVariantComponent

All Implemented Interfaces:

ca.uhn.fhir.model.api.IElement, Serializable, org.hl7.fhir.instance.model.api.IBase, org.hl7.fhir.instance.model.api.IBaseBackboneElement, org.hl7.fhir.instance.model.api.IBaseElement, org.hl7.fhir.instance.model.api.IBaseHasExtensions, org.hl7.fhir.instance.model.api.IBaseHasModifierExtensions

Enclosing class:

MolecularSequence

public static class MolecularSequence.MolecularSequenceStructureVariantComponent
extends BackboneElement
implements org.hl7.fhir.instance.model.api.IBaseBackboneElement

See Also:

• Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
protected BooleanType	exact	Used to indicate if the outer and inner start-end values have the same meaning.
protected MolecularSequence.MolecularSequenceStructureVariantInnerComponent	inner	Structural variant inner.
protected IntegerType	length	Length of the variant chromosome.
protected MolecularSequence.MolecularSequenceStructureVariantOuterComponent	outer	Structural variant outer.
protected CodeableConcept	variantType	Information about chromosome structure variation DNA change type.

Fields inherited from class org.hl7.fhir.r4.model.BackboneElement

modifierExtension

Fields inherited from class org.hl7.fhir.r4.model.Element

extension, id

Constructor Summary

Constructors

Constructor	Description
MolecularSequenceStructureVariantComponent()	Constructor

Method Summary

Modifier and Type	Method	Description
Base	addChild(String name)
MolecularSequence.MolecularSequenceStructureVariantComponent	copy()
void	copyValues(MolecularSequence.MolecularSequenceStructureVariantComponent dst)
boolean	equalsDeep(Base other_)
boolean	equalsShallow(Base other_)
String	fhirType()
boolean	getExact()
BooleanType	getExactElement()
MolecularSequence.MolecularSequenceStructureVariantInnerComponent	getInner()
int	getLength()
IntegerType	getLengthElement()
Property	getNamedProperty(int _hash, String _name, boolean _checkValid)
MolecularSequence.MolecularSequenceStructureVariantOuterComponent	getOuter()
Base[]	getProperty(int hash, String name, boolean checkValid)
String[]	getTypesForProperty(int hash, String name)
CodeableConcept	getVariantType()
boolean	hasExact()
boolean	hasExactElement()
boolean	hasInner()
boolean	hasLength()
boolean	hasLengthElement()
boolean	hasOuter()
boolean	hasVariantType()
boolean	isEmpty()
protected void	listChildren(List<Property> children)
Base	makeProperty(int hash, String name)
void	removeChild(String name, Base value)
MolecularSequence.MolecularSequenceStructureVariantComponent	setExact(boolean value)
MolecularSequence.MolecularSequenceStructureVariantComponent	setExactElement(BooleanType value)
MolecularSequence.MolecularSequenceStructureVariantComponent	setInner(MolecularSequence.MolecularSequenceStructureVariantInnerComponent value)
MolecularSequence.MolecularSequenceStructureVariantComponent	setLength(int value)
MolecularSequence.MolecularSequenceStructureVariantComponent	setLengthElement(IntegerType value)
MolecularSequence.MolecularSequenceStructureVariantComponent	setOuter(MolecularSequence.MolecularSequenceStructureVariantOuterComponent value)
Base	setProperty(int hash, String name, Base value)
Base	setProperty(String name, Base value)
MolecularSequence.MolecularSequenceStructureVariantComponent	setVariantType(CodeableConcept value)

Methods inherited from class org.hl7.fhir.r4.model.BackboneElement

addModifierExtension, addModifierExtension, addModifierExtension, checkNoModifiers, copyExtensions, copyNewExtensions, copyValues, getExtensionByUrl, getExtensionsByUrl, getExtensionsByUrl, getModifierExtension, getModifierExtensionFirstRep, hasExtension, hasExtension, hasModifierExtension, removeExtension, setModifierExtension

Methods inherited from class org.hl7.fhir.r4.model.Element

addExtension, addExtension, addExtension, copyExtensions, copyNewExtensions, copyValues, getExtension, getExtensionFirstRep, getExtensionString, getId, getIdBase, getIdElement, hasExtension, hasExtension, hasId, hasIdElement, isDisallowExtensions, noExtensions, setDisallowExtensions, setExtension, setId, setIdBase, setIdElement

Methods inherited from class org.hl7.fhir.r4.model.Base

castToAddress, castToAnnotation, castToAttachment, castToBase64Binary, castToBoolean, castToCanonical, castToCode, castToCodeableConcept, castToCoding, castToContactDetail, castToContactPoint, castToContributor, castToDataRequirement, castToDate, castToDateTime, castToDecimal, castToDosage, castToDuration, castToElementDefinition, castToExpression, castToExtension, castToHumanName, castToId, castToIdentifier, castToInstant, castToInteger, castToMarkdown, castToMarketingStatus, castToMeta, castToMoney, castToNarrative, castToOid, castToParameterDefinition, castToPeriod, castToPopulation, castToPositiveInt, castToProdCharacteristic, castToProductShelfLife, castToQuantity, castToRange, castToRatio, castToReference, castToRelatedArtifact, castToResource, castToSampledData, castToSignature, castToSimpleQuantity, castToString, castToSubstanceAmount, castToTime, castToTiming, castToTriggerDefinition, castToType, castToUnsignedInt, castToUri, castToUrl, castToUsageContext, castToXhtml, castToXhtmlString, children, clearUserData, compareDeep, compareDeep, compareDeep, compareDeep, compareValues, compareValues, copyValues, dateTimeValue, equals, getChildByName, getChildValueByName, getFormatCommentsPost, getFormatCommentsPre, getNamedProperty, getUserData, getUserInt, getUserString, getXhtml, hasFormatComment, hasPrimitiveValue, hasType, hasUserData, isBooleanPrimitive, isDateTime, isMetadataBased, isPrimitive, isResource, listChildrenByName, listChildrenByName, primitiveValue, setUserData, setUserDataINN, setXhtml

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.hl7.fhir.instance.model.api.IBase

getFormatCommentsPost, getFormatCommentsPre, getUserData, hasFormatComment, setUserData

Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseElement

getUserData, setUserData

Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseHasExtensions

addExtension, getExtension, hasExtension

Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseHasModifierExtensions

addModifierExtension, getModifierExtension, hasModifierExtension

Field Details

variantType

protected CodeableConcept variantType

Information about chromosome structure variation DNA change type.

exact

protected BooleanType exact

Used to indicate if the outer and inner start-end values have the same meaning.

length

protected IntegerType length

Length of the variant chromosome.

outer

protected MolecularSequence.MolecularSequenceStructureVariantOuterComponent outer

Structural variant outer.

inner

protected MolecularSequence.MolecularSequenceStructureVariantInnerComponent inner

Structural variant inner.

Constructor Details

MolecularSequenceStructureVariantComponent

public MolecularSequenceStructureVariantComponent()

Constructor

Method Details

getVariantType

public CodeableConcept getVariantType()

Returns:

variantType (Information about chromosome structure variation DNA change type.)

hasVariantType

public boolean hasVariantType()

setVariantType

public MolecularSequence.MolecularSequenceStructureVariantComponent setVariantType(CodeableConcept value)

Parameters:

value - variantType (Information about chromosome structure variation DNA change type.)

getExactElement

public BooleanType getExactElement()

Returns:

exact (Used to indicate if the outer and inner start-end values have the same meaning.). This is the underlying object with id, value and extensions. The accessor "getExact" gives direct access to the value

hasExactElement

public boolean hasExactElement()

hasExact

public boolean hasExact()

setExactElement

public MolecularSequence.MolecularSequenceStructureVariantComponent setExactElement(BooleanType value)

Parameters:

value - exact (Used to indicate if the outer and inner start-end values have the same meaning.). This is the underlying object with id, value and extensions. The accessor "getExact" gives direct access to the value

getExact

public boolean getExact()

Returns:

Used to indicate if the outer and inner start-end values have the same meaning.

setExact

public MolecularSequence.MolecularSequenceStructureVariantComponent setExact(boolean value)

Parameters:

value - Used to indicate if the outer and inner start-end values have the same meaning.

getLengthElement

public IntegerType getLengthElement()

Returns:

length (Length of the variant chromosome.). This is the underlying object with id, value and extensions. The accessor "getLength" gives direct access to the value

hasLengthElement

public boolean hasLengthElement()

hasLength

public boolean hasLength()

setLengthElement

public MolecularSequence.MolecularSequenceStructureVariantComponent setLengthElement(IntegerType value)

Parameters:

value - length (Length of the variant chromosome.). This is the underlying object with id, value and extensions. The accessor "getLength" gives direct access to the value

getLength

public int getLength()

Returns:

Length of the variant chromosome.

setLength

public MolecularSequence.MolecularSequenceStructureVariantComponent setLength(int value)

Parameters:

value - Length of the variant chromosome.

getOuter

public MolecularSequence.MolecularSequenceStructureVariantOuterComponent getOuter()

Returns:

outer (Structural variant outer.)

hasOuter

public boolean hasOuter()

setOuter

public MolecularSequence.MolecularSequenceStructureVariantComponent setOuter(MolecularSequence.MolecularSequenceStructureVariantOuterComponent value)

Parameters:

value - outer (Structural variant outer.)

getInner

public MolecularSequence.MolecularSequenceStructureVariantInnerComponent getInner()

Returns:

inner (Structural variant inner.)

hasInner

public boolean hasInner()

setInner

public MolecularSequence.MolecularSequenceStructureVariantComponent setInner(MolecularSequence.MolecularSequenceStructureVariantInnerComponent value)

Parameters:

value - inner (Structural variant inner.)

listChildren

protected void listChildren(List<Property> children)

Overrides:

listChildren in class BackboneElement

getNamedProperty

public Property getNamedProperty(int _hash,
 String _name,
 boolean _checkValid)
                          throws org.hl7.fhir.exceptions.FHIRException

Overrides:

getNamedProperty in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

getProperty

public Base[] getProperty(int hash,
 String name,
 boolean checkValid)
                   throws org.hl7.fhir.exceptions.FHIRException

Overrides:

getProperty in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

setProperty

public Base setProperty(int hash,
 String name,
 Base value)
                 throws org.hl7.fhir.exceptions.FHIRException

Overrides:

setProperty in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

setProperty

public Base setProperty(String name,
 Base value)
                 throws org.hl7.fhir.exceptions.FHIRException

Overrides:

setProperty in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

removeChild

public void removeChild(String name,
 Base value)
                 throws org.hl7.fhir.exceptions.FHIRException

Overrides:

removeChild in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

makeProperty

public Base makeProperty(int hash,
 String name)
                  throws org.hl7.fhir.exceptions.FHIRException

Overrides:

makeProperty in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

getTypesForProperty

public String[] getTypesForProperty(int hash,
 String name)
                             throws org.hl7.fhir.exceptions.FHIRException

Overrides:

getTypesForProperty in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

addChild

public Base addChild(String name)
              throws org.hl7.fhir.exceptions.FHIRException

Overrides:

addChild in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

copy

public MolecularSequence.MolecularSequenceStructureVariantComponent copy()

Specified by:

copy in class BackboneElement

copyValues

public void copyValues(MolecularSequence.MolecularSequenceStructureVariantComponent dst)

equalsDeep

public boolean equalsDeep(Base other_)

Overrides:

equalsDeep in class BackboneElement

equalsShallow

public boolean equalsShallow(Base other_)

Overrides:

equalsShallow in class BackboneElement

isEmpty

public boolean isEmpty()

Specified by:

isEmpty in interface org.hl7.fhir.instance.model.api.IBase

Overrides:

isEmpty in class BackboneElement

fhirType

public String fhirType()

Specified by:

fhirType in interface org.hl7.fhir.instance.model.api.IBase

Overrides:

fhirType in class BackboneElement