Package org.hl7.fhir.r5.model

Class GenomicStudy.GenomicStudyAnalysisInputComponent

java.lang.Object

org.hl7.fhir.r5.model.Base

org.hl7.fhir.r5.model.Element

org.hl7.fhir.r5.model.BackboneElement

org.hl7.fhir.r5.model.GenomicStudy.GenomicStudyAnalysisInputComponent

All Implemented Interfaces:

ca.uhn.fhir.model.api.IElement, Serializable, org.hl7.fhir.instance.model.api.IBase, org.hl7.fhir.instance.model.api.IBaseBackboneElement, org.hl7.fhir.instance.model.api.IBaseElement, org.hl7.fhir.instance.model.api.IBaseHasExtensions, org.hl7.fhir.instance.model.api.IBaseHasModifierExtensions

Enclosing class:

GenomicStudy

public static class GenomicStudy.GenomicStudyAnalysisInputComponent
extends BackboneElement
implements org.hl7.fhir.instance.model.api.IBaseBackboneElement

See Also:

• Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class org.hl7.fhir.r5.model.Base

Base.ProfileSource, Base.ValidationInfo, Base.ValidationMode, Base.ValidationReason

Field Summary

Fields

Modifier and Type	Field	Description
protected Reference	file	File containing input data.
protected DataType	generatedBy	The analysis event or other GenomicStudy that generated this input file.
protected CodeableConcept	type	Type of input data, e.g., BAM, CRAM, or FASTA.

Fields inherited from class org.hl7.fhir.r5.model.BackboneElement

modifierExtension

Fields inherited from class org.hl7.fhir.r5.model.Element

extension, id

Constructor Summary

Constructors

Constructor	Description
GenomicStudyAnalysisInputComponent()	Constructor

Method Summary

Modifier and Type	Method	Description
Base	addChild(String name)
GenomicStudy.GenomicStudyAnalysisInputComponent	copy()
void	copyValues(GenomicStudy.GenomicStudyAnalysisInputComponent dst)
boolean	equalsDeep(Base other_)
boolean	equalsShallow(Base other_)
String	fhirType()
Reference	getFile()
DataType	getGeneratedBy()
Identifier	getGeneratedByIdentifier()
Reference	getGeneratedByReference()
Property	getNamedProperty(int _hash, String _name, boolean _checkValid)
Base[]	getProperty(int hash, String name, boolean checkValid)
CodeableConcept	getType()
String[]	getTypesForProperty(int hash, String name)
boolean	hasFile()
boolean	hasGeneratedBy()
boolean	hasGeneratedByIdentifier()
boolean	hasGeneratedByReference()
boolean	hasType()
boolean	isEmpty()
protected void	listChildren(List<Property> children)
Base	makeProperty(int hash, String name)
void	removeChild(String name, Base value)
GenomicStudy.GenomicStudyAnalysisInputComponent	setFile(Reference value)
GenomicStudy.GenomicStudyAnalysisInputComponent	setGeneratedBy(DataType value)
Base	setProperty(int hash, String name, Base value)
Base	setProperty(String name, Base value)
GenomicStudy.GenomicStudyAnalysisInputComponent	setType(CodeableConcept value)

Methods inherited from class org.hl7.fhir.r5.model.BackboneElement

addModifierExtension, addModifierExtension, addModifierExtension, checkNoModifiers, copyExtensions, copyNewExtensions, copyValues, getExtensionByUrl, getExtensionsByUrl, getExtensionsByUrl, getExtensionValue, getModifierExtension, getModifierExtensionFirstRep, hasExtension, hasExtension, hasModifierExtension, removeExtension, setModifierExtension

Methods inherited from class org.hl7.fhir.r5.model.Element

addExtension, addExtension, addExtension, copyExtensions, copyNewExtensions, copyValues, getExtension, getExtensionByUrl, getExtensionFirstRep, getExtensionString, getExtensionString, getFHIRPublicationVersion, getId, getIdBase, getIdElement, getStandardsStatus, hasExtension, hasExtension, hasId, hasIdElement, isDisallowExtensions, noExtensions, setDisallowExtensions, setExtension, setId, setIdBase, setIdElement, setStandardsStatus

Methods inherited from class org.hl7.fhir.r5.model.Base

addDefinition, addFormatCommentsPost, addFormatCommentsPre, addValidationMessage, canHavePrimitiveValue, children, clearUserData, compareDeep, compareDeep, compareDeep, compareDeep, compareValues, compareValues, copyFormatComments, copyUserData, copyValues, dateTimeValue, equals, executeFunction, getChildByName, getChildValueByName, getFormatCommentsPost, getFormatCommentsPre, getNamedProperty, getUserData, getUserInt, getUserString, getValidationInfo, getValidationMessages, getXhtml, hasFormatComment, hasFormatCommentPost, hasFormatCommentPre, hasPrimitiveValue, hasType, hasUserData, hasValidated, hasValidationInfo, hasValidationMessages, isBooleanPrimitive, isCopyUserData, isDateTime, isMetadataBased, isPrimitive, isResource, listChildrenByName, listChildrenByName, primitiveValue, setCopyUserData, setUserData, setUserDataINN, setXhtml

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.hl7.fhir.instance.model.api.IBase

getFormatCommentsPost, getFormatCommentsPre, getUserData, hasFormatComment, setUserData

Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseElement

getUserData, setUserData

Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseHasExtensions

addExtension, getExtension, hasExtension

Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseHasModifierExtensions

addModifierExtension, getModifierExtension, hasModifierExtension

Field Details

file

protected Reference file

File containing input data.

type

protected CodeableConcept type

Type of input data, e.g., BAM, CRAM, or FASTA.

generatedBy

protected DataType generatedBy

The analysis event or other GenomicStudy that generated this input file.

Constructor Details

GenomicStudyAnalysisInputComponent

public GenomicStudyAnalysisInputComponent()

Constructor

Method Details

getFile

public Reference getFile()

Returns:

file (File containing input data.)

hasFile

public boolean hasFile()

setFile

public GenomicStudy.GenomicStudyAnalysisInputComponent setFile(Reference value)

Parameters:

value - file (File containing input data.)

getType

public CodeableConcept getType()

Returns:

type (Type of input data, e.g., BAM, CRAM, or FASTA.)

hasType

public boolean hasType()

setType

public GenomicStudy.GenomicStudyAnalysisInputComponent setType(CodeableConcept value)

Parameters:

value - type (Type of input data, e.g., BAM, CRAM, or FASTA.)

getGeneratedBy

public DataType getGeneratedBy()

Returns:

generatedBy (The analysis event or other GenomicStudy that generated this input file.)

getGeneratedByIdentifier

public Identifier getGeneratedByIdentifier()
                                    throws org.hl7.fhir.exceptions.FHIRException

Returns:

generatedBy (The analysis event or other GenomicStudy that generated this input file.)

Throws:

org.hl7.fhir.exceptions.FHIRException

hasGeneratedByIdentifier

public boolean hasGeneratedByIdentifier()

getGeneratedByReference

public Reference getGeneratedByReference()
                                  throws org.hl7.fhir.exceptions.FHIRException

Returns:

generatedBy (The analysis event or other GenomicStudy that generated this input file.)

Throws:

org.hl7.fhir.exceptions.FHIRException

hasGeneratedByReference

public boolean hasGeneratedByReference()

hasGeneratedBy

public boolean hasGeneratedBy()

setGeneratedBy

public GenomicStudy.GenomicStudyAnalysisInputComponent setGeneratedBy(DataType value)

Parameters:

value - generatedBy (The analysis event or other GenomicStudy that generated this input file.)

listChildren

protected void listChildren(List<Property> children)

Overrides:

listChildren in class BackboneElement

getNamedProperty

public Property getNamedProperty(int _hash,
 String _name,
 boolean _checkValid)
                          throws org.hl7.fhir.exceptions.FHIRException

Overrides:

getNamedProperty in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

getProperty

public Base[] getProperty(int hash,
 String name,
 boolean checkValid)
                   throws org.hl7.fhir.exceptions.FHIRException

Overrides:

getProperty in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

setProperty

public Base setProperty(int hash,
 String name,
 Base value)
                 throws org.hl7.fhir.exceptions.FHIRException

Overrides:

setProperty in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

setProperty

public Base setProperty(String name,
 Base value)
                 throws org.hl7.fhir.exceptions.FHIRException

Overrides:

setProperty in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

removeChild

public void removeChild(String name,
 Base value)
                 throws org.hl7.fhir.exceptions.FHIRException

Overrides:

removeChild in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

makeProperty

public Base makeProperty(int hash,
 String name)
                  throws org.hl7.fhir.exceptions.FHIRException

Overrides:

makeProperty in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

getTypesForProperty

public String[] getTypesForProperty(int hash,
 String name)
                             throws org.hl7.fhir.exceptions.FHIRException

Overrides:

getTypesForProperty in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

addChild

public Base addChild(String name)
              throws org.hl7.fhir.exceptions.FHIRException

Overrides:

addChild in class BackboneElement

Throws:

org.hl7.fhir.exceptions.FHIRException

copy

public GenomicStudy.GenomicStudyAnalysisInputComponent copy()

Specified by:

copy in class BackboneElement

copyValues

public void copyValues(GenomicStudy.GenomicStudyAnalysisInputComponent dst)

equalsDeep

public boolean equalsDeep(Base other_)

Overrides:

equalsDeep in class BackboneElement

equalsShallow

public boolean equalsShallow(Base other_)

Overrides:

equalsShallow in class BackboneElement

isEmpty

public boolean isEmpty()

Specified by:

isEmpty in interface org.hl7.fhir.instance.model.api.IBase

Overrides:

isEmpty in class BackboneElement

fhirType

public String fhirType()

Specified by:

fhirType in interface org.hl7.fhir.instance.model.api.IBase

Overrides:

fhirType in class BackboneElement

Returns:

the FHIR type name of the instance (not the java class name)