![](/hapi-fhir/images/logos/raccoon-forwards.png)
Class GenomicStudy
- All Implemented Interfaces:
ca.uhn.fhir.model.api.IElement
,Serializable
,org.hl7.fhir.instance.model.api.IAnyResource
,org.hl7.fhir.instance.model.api.IBase
,org.hl7.fhir.instance.model.api.IBaseHasExtensions
,org.hl7.fhir.instance.model.api.IBaseHasModifierExtensions
,org.hl7.fhir.instance.model.api.IBaseResource
,org.hl7.fhir.instance.model.api.IDomainResource
- See Also:
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Nested Class Summary
Nested ClassesModifier and TypeClassDescriptionstatic class
static class
static class
static class
static class
static enum
static class
Nested classes/interfaces inherited from class org.hl7.fhir.r5.model.Base
Base.ProfileSource, Base.ValidationInfo, Base.ValidationMode, Base.ValidationReason
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Field Summary
FieldsModifier and TypeFieldDescriptionprotected List
<GenomicStudy.GenomicStudyAnalysisComponent> The details about a specific analysis that was performed in this GenomicStudy.Event resources that the genomic study is based on.protected MarkdownType
Description of the genomic study.protected Reference
The healthcare event with which this genomics study is associated.static final ca.uhn.fhir.rest.gclient.ReferenceClientParam
Fluent Client search parameter constant for focusprotected List
<Identifier> Identifiers for this genomic study.static final ca.uhn.fhir.rest.gclient.TokenClientParam
Fluent Client search parameter constant for identifierstatic final ca.uhn.fhir.model.api.Include
Constant for fluent queries to be used to add include statements.static final ca.uhn.fhir.model.api.Include
Constant for fluent queries to be used to add include statements.static final ca.uhn.fhir.model.api.Include
Constant for fluent queries to be used to add include statements.protected CanonicalType
The defined protocol that describes the study.protected UriType
The URL pointing to an externally maintained protocol that describes the study.Healthcare professionals who interpreted the genomic study.protected List
<Annotation> Comments related to the genomic study.static final ca.uhn.fhir.rest.gclient.ReferenceClientParam
Fluent Client search parameter constant for patientprotected List
<CodeableReference> Why the genomic study was performed.protected Reference
Healthcare professional who requested or referred the genomic study.static final String
Search parameter: focusstatic final String
Search parameter: identifierstatic final String
Search parameter: patientstatic final String
Search parameter: statusstatic final String
Search parameter: subjectprotected DateTimeType
When the genomic study was started.protected Enumeration
<GenomicStudy.GenomicStudyStatus> The status of the genomic study.static final ca.uhn.fhir.rest.gclient.TokenClientParam
Fluent Client search parameter constant for statusprotected Reference
The primary subject of the genomic study.static final ca.uhn.fhir.rest.gclient.ReferenceClientParam
Fluent Client search parameter constant for subjectprotected List
<CodeableConcept> The type of the study, e.g., Familial variant segregation, Functional variation detection, or Gene expression profiling.Fields inherited from class org.hl7.fhir.r5.model.DomainResource
contained, extension, modifierExtension, SP_TEXT, text, TEXT
Fields inherited from class org.hl7.fhir.r5.model.Resource
id, implicitRules, language, meta
Fields inherited from interface org.hl7.fhir.instance.model.api.IAnyResource
RES_ID, RES_LAST_UPDATED, RES_PROFILE, RES_SECURITY, RES_TAG, SP_RES_ID, SP_RES_LAST_UPDATED, SP_RES_PROFILE, SP_RES_SECURITY, SP_RES_TAG
Fields inherited from interface org.hl7.fhir.instance.model.api.IBaseResource
INCLUDE_ALL, WILDCARD_ALL_SET
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Constructor Summary
ConstructorsConstructorDescriptionConstructorGenomicStudy
(GenomicStudy.GenomicStudyStatus status, Reference subject) Constructor -
Method Summary
Modifier and TypeMethodDescriptionaddNote()
addType()
copy()
void
copyValues
(GenomicStudy dst) boolean
equalsDeep
(Base other_) boolean
equalsShallow
(Base other_) fhirType()
getNamedProperty
(int _hash, String _name, boolean _checkValid) getNote()
Base[]
getProperty
(int hash, String name, boolean checkValid) getType()
String[]
getTypesForProperty
(int hash, String name) boolean
boolean
boolean
boolean
boolean
boolean
boolean
boolean
boolean
boolean
boolean
boolean
hasNote()
boolean
boolean
boolean
boolean
boolean
boolean
boolean
boolean
hasType()
boolean
isEmpty()
protected void
listChildren
(List<Property> children) makeProperty
(int hash, String name) void
removeChild
(String name, Base value) setAnalysis
(List<GenomicStudy.GenomicStudyAnalysisComponent> theAnalysis) setBasedOn
(List<Reference> theBasedOn) setDescription
(String value) setEncounter
(Reference value) setIdentifier
(List<Identifier> theIdentifier) setInstantiatesCanonical
(String value) setInstantiatesUri
(String value) setInstantiatesUriElement
(UriType value) setInterpreter
(List<Reference> theInterpreter) setNote
(List<Annotation> theNote) setProperty
(int hash, String name, Base value) setProperty
(String name, Base value) setReason
(List<CodeableReference> theReason) setReferrer
(Reference value) setStartDate
(Date value) setStartDateElement
(DateTimeType value) setSubject
(Reference value) setType
(List<CodeableConcept> theType) protected GenomicStudy
Methods inherited from class org.hl7.fhir.r5.model.DomainResource
addContained, addExtension, addExtension, addExtension, addModifierExtension, addModifierExtension, checkNoModifiers, copyValues, getContained, getContained, getExtension, getExtensionByUrl, getExtensionsByUrl, getExtensionsByUrl, getModifierExtension, getModifierExtensionsByUrl, getStandardsStatus, getText, hasContained, hasExtension, hasExtension, hasExtension, hasModifierExtension, hasText, setContained, setExtension, setModifierExtension, setStandardsStatus, setText
Methods inherited from class org.hl7.fhir.r5.model.Resource
copyValues, getFHIRPublicationVersion, getId, getIdBase, getIdElement, getIdPart, getImplicitRules, getImplicitRulesElement, getLanguage, getLanguage, getLanguageElement, getMeta, getSourcePackage, getWebPath, hasId, hasIdElement, hasImplicitRules, hasImplicitRulesElement, hasLanguage, hasLanguageElement, hasMeta, hasSourcePackage, hasWebPath, setId, setIdBase, setIdElement, setImplicitRules, setImplicitRulesElement, setLanguage, setLanguageElement, setMeta, setSourcePackage, setWebPath
Methods inherited from class org.hl7.fhir.r5.model.BaseResource
getStructureFhirVersionEnum, isResource, setId
Methods inherited from class org.hl7.fhir.r5.model.Base
addDefinition, addFormatCommentsPost, addFormatCommentsPre, addValidationMessage, canHavePrimitiveValue, children, clearUserData, compareDeep, compareDeep, compareDeep, compareDeep, compareValues, compareValues, copyFormatComments, copyUserData, copyValues, dateTimeValue, equals, getChildByName, getChildValueByName, getFormatCommentsPost, getFormatCommentsPre, getNamedProperty, getUserData, getUserInt, getUserString, getValidationInfo, getValidationMessages, getXhtml, hasFormatComment, hasFormatCommentPost, hasFormatCommentPre, hasPrimitiveValue, hasType, hasUserData, hasValidated, hasValidationInfo, hasValidationMessages, isBooleanPrimitive, isCopyUserData, isDateTime, isMetadataBased, isPrimitive, listChildrenByName, listChildrenByName, primitiveValue, setCopyUserData, setUserData, setUserDataINN
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
Methods inherited from interface org.hl7.fhir.instance.model.api.IAnyResource
getId, getIdElement, getLanguageElement, getUserData, setId, setUserData
Methods inherited from interface org.hl7.fhir.instance.model.api.IBase
getFormatCommentsPost, getFormatCommentsPre, hasFormatComment
Methods inherited from interface org.hl7.fhir.instance.model.api.IBaseResource
getMeta, getStructureFhirVersionEnum, isDeleted, setId
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Field Details
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identifier
Identifiers for this genomic study. -
status
The status of the genomic study. -
type
The type of the study, e.g., Familial variant segregation, Functional variation detection, or Gene expression profiling. -
subject
The primary subject of the genomic study. -
encounter
The healthcare event with which this genomics study is associated. -
startDate
When the genomic study was started. -
basedOn
Event resources that the genomic study is based on. -
referrer
Healthcare professional who requested or referred the genomic study. -
interpreter
Healthcare professionals who interpreted the genomic study. -
reason
Why the genomic study was performed. -
instantiatesCanonical
The defined protocol that describes the study. -
instantiatesUri
The URL pointing to an externally maintained protocol that describes the study. -
note
Comments related to the genomic study. -
description
Description of the genomic study. -
analysis
The details about a specific analysis that was performed in this GenomicStudy. -
SP_FOCUS
Search parameter: focusDescription: What the genomic study analysis is about, when it is not about the subject of record
Type: reference
Path: GenomicStudy.analysis.focus
- See Also:
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FOCUS
Fluent Client search parameter constant for focusDescription: What the genomic study analysis is about, when it is not about the subject of record
Type: reference
Path: GenomicStudy.analysis.focus
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INCLUDE_FOCUS
Constant for fluent queries to be used to add include statements. Specifies the path value of "GenomicStudy:focus". -
SP_IDENTIFIER
Search parameter: identifierDescription: Identifiers for the Study
Type: token
Path: GenomicStudy.identifier
- See Also:
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IDENTIFIER
Fluent Client search parameter constant for identifierDescription: Identifiers for the Study
Type: token
Path: GenomicStudy.identifier
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SP_PATIENT
Search parameter: patientDescription: Who the study is about
Type: reference
Path: GenomicStudy.subject.where(resolve() is Patient)
- See Also:
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PATIENT
Fluent Client search parameter constant for patientDescription: Who the study is about
Type: reference
Path: GenomicStudy.subject.where(resolve() is Patient)
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INCLUDE_PATIENT
Constant for fluent queries to be used to add include statements. Specifies the path value of "GenomicStudy:patient". -
SP_STATUS
Search parameter: statusDescription: The status of the study
Type: token
Path: GenomicStudy.status
- See Also:
-
STATUS
Fluent Client search parameter constant for statusDescription: The status of the study
Type: token
Path: GenomicStudy.status
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SP_SUBJECT
Search parameter: subjectDescription: Who the study is about
Type: reference
Path: GenomicStudy.subject
- See Also:
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SUBJECT
Fluent Client search parameter constant for subjectDescription: Who the study is about
Type: reference
Path: GenomicStudy.subject
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INCLUDE_SUBJECT
Constant for fluent queries to be used to add include statements. Specifies the path value of "GenomicStudy:subject".
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Constructor Details
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GenomicStudy
public GenomicStudy()Constructor -
GenomicStudy
Constructor
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Method Details
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getIdentifier
- Returns:
identifier
(Identifiers for this genomic study.)
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setIdentifier
- Returns:
- Returns a reference to
this
for easy method chaining
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hasIdentifier
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addIdentifier
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addIdentifier
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getIdentifierFirstRep
- Returns:
- The first repetition of repeating field
identifier
, creating it if it does not already exist {3}
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getStatusElement
- Returns:
status
(The status of the genomic study.). This is the underlying object with id, value and extensions. The accessor "getStatus" gives direct access to the value
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hasStatusElement
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hasStatus
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setStatusElement
- Parameters:
value
-status
(The status of the genomic study.). This is the underlying object with id, value and extensions. The accessor "getStatus" gives direct access to the value
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getStatus
- Returns:
- The status of the genomic study.
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setStatus
- Parameters:
value
- The status of the genomic study.
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getType
- Returns:
type
(The type of the study, e.g., Familial variant segregation, Functional variation detection, or Gene expression profiling.)
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setType
- Returns:
- Returns a reference to
this
for easy method chaining
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hasType
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addType
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addType
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getTypeFirstRep
- Returns:
- The first repetition of repeating field
type
, creating it if it does not already exist {3}
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getSubject
- Returns:
subject
(The primary subject of the genomic study.)
-
hasSubject
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setSubject
- Parameters:
value
-subject
(The primary subject of the genomic study.)
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getEncounter
- Returns:
encounter
(The healthcare event with which this genomics study is associated.)
-
hasEncounter
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setEncounter
- Parameters:
value
-encounter
(The healthcare event with which this genomics study is associated.)
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getStartDateElement
- Returns:
startDate
(When the genomic study was started.). This is the underlying object with id, value and extensions. The accessor "getStartDate" gives direct access to the value
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hasStartDateElement
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hasStartDate
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setStartDateElement
- Parameters:
value
-startDate
(When the genomic study was started.). This is the underlying object with id, value and extensions. The accessor "getStartDate" gives direct access to the value
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getStartDate
- Returns:
- When the genomic study was started.
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setStartDate
- Parameters:
value
- When the genomic study was started.
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getBasedOn
- Returns:
basedOn
(Event resources that the genomic study is based on.)
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setBasedOn
- Returns:
- Returns a reference to
this
for easy method chaining
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hasBasedOn
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addBasedOn
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addBasedOn
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getBasedOnFirstRep
- Returns:
- The first repetition of repeating field
basedOn
, creating it if it does not already exist {3}
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getReferrer
- Returns:
referrer
(Healthcare professional who requested or referred the genomic study.)
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hasReferrer
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setReferrer
- Parameters:
value
-referrer
(Healthcare professional who requested or referred the genomic study.)
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getInterpreter
- Returns:
interpreter
(Healthcare professionals who interpreted the genomic study.)
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setInterpreter
- Returns:
- Returns a reference to
this
for easy method chaining
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hasInterpreter
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addInterpreter
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addInterpreter
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getInterpreterFirstRep
- Returns:
- The first repetition of repeating field
interpreter
, creating it if it does not already exist {3}
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getReason
- Returns:
reason
(Why the genomic study was performed.)
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setReason
- Returns:
- Returns a reference to
this
for easy method chaining
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hasReason
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addReason
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addReason
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getReasonFirstRep
- Returns:
- The first repetition of repeating field
reason
, creating it if it does not already exist {3}
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getInstantiatesCanonicalElement
- Returns:
instantiatesCanonical
(The defined protocol that describes the study.). This is the underlying object with id, value and extensions. The accessor "getInstantiatesCanonical" gives direct access to the value
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hasInstantiatesCanonicalElement
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hasInstantiatesCanonical
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setInstantiatesCanonicalElement
- Parameters:
value
-instantiatesCanonical
(The defined protocol that describes the study.). This is the underlying object with id, value and extensions. The accessor "getInstantiatesCanonical" gives direct access to the value
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getInstantiatesCanonical
- Returns:
- The defined protocol that describes the study.
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setInstantiatesCanonical
- Parameters:
value
- The defined protocol that describes the study.
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getInstantiatesUriElement
- Returns:
instantiatesUri
(The URL pointing to an externally maintained protocol that describes the study.). This is the underlying object with id, value and extensions. The accessor "getInstantiatesUri" gives direct access to the value
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hasInstantiatesUriElement
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hasInstantiatesUri
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setInstantiatesUriElement
- Parameters:
value
-instantiatesUri
(The URL pointing to an externally maintained protocol that describes the study.). This is the underlying object with id, value and extensions. The accessor "getInstantiatesUri" gives direct access to the value
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getInstantiatesUri
- Returns:
- The URL pointing to an externally maintained protocol that describes the study.
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setInstantiatesUri
- Parameters:
value
- The URL pointing to an externally maintained protocol that describes the study.
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getNote
- Returns:
note
(Comments related to the genomic study.)
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setNote
- Returns:
- Returns a reference to
this
for easy method chaining
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hasNote
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addNote
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addNote
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getNoteFirstRep
- Returns:
- The first repetition of repeating field
note
, creating it if it does not already exist {3}
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getDescriptionElement
- Returns:
description
(Description of the genomic study.). This is the underlying object with id, value and extensions. The accessor "getDescription" gives direct access to the value
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hasDescriptionElement
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hasDescription
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setDescriptionElement
- Parameters:
value
-description
(Description of the genomic study.). This is the underlying object with id, value and extensions. The accessor "getDescription" gives direct access to the value
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getDescription
- Returns:
- Description of the genomic study.
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setDescription
- Parameters:
value
- Description of the genomic study.
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getAnalysis
- Returns:
analysis
(The details about a specific analysis that was performed in this GenomicStudy.)
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setAnalysis
- Returns:
- Returns a reference to
this
for easy method chaining
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hasAnalysis
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addAnalysis
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addAnalysis
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getAnalysisFirstRep
- Returns:
- The first repetition of repeating field
analysis
, creating it if it does not already exist {3}
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listChildren
- Overrides:
listChildren
in classDomainResource
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getNamedProperty
public Property getNamedProperty(int _hash, String _name, boolean _checkValid) throws org.hl7.fhir.exceptions.FHIRException - Overrides:
getNamedProperty
in classDomainResource
- Throws:
org.hl7.fhir.exceptions.FHIRException
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getProperty
public Base[] getProperty(int hash, String name, boolean checkValid) throws org.hl7.fhir.exceptions.FHIRException - Overrides:
getProperty
in classDomainResource
- Throws:
org.hl7.fhir.exceptions.FHIRException
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setProperty
public Base setProperty(int hash, String name, Base value) throws org.hl7.fhir.exceptions.FHIRException - Overrides:
setProperty
in classDomainResource
- Throws:
org.hl7.fhir.exceptions.FHIRException
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setProperty
- Overrides:
setProperty
in classDomainResource
- Throws:
org.hl7.fhir.exceptions.FHIRException
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removeChild
- Overrides:
removeChild
in classDomainResource
- Throws:
org.hl7.fhir.exceptions.FHIRException
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makeProperty
- Overrides:
makeProperty
in classDomainResource
- Throws:
org.hl7.fhir.exceptions.FHIRException
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getTypesForProperty
public String[] getTypesForProperty(int hash, String name) throws org.hl7.fhir.exceptions.FHIRException - Overrides:
getTypesForProperty
in classDomainResource
- Throws:
org.hl7.fhir.exceptions.FHIRException
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addChild
- Overrides:
addChild
in classDomainResource
- Throws:
org.hl7.fhir.exceptions.FHIRException
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fhirType
- Specified by:
fhirType
in interfaceorg.hl7.fhir.instance.model.api.IBase
- Overrides:
fhirType
in classDomainResource
- Returns:
- the FHIR type name of the instance (not the java class name)
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copy
- Specified by:
copy
in classDomainResource
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copyValues
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typedCopy
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equalsDeep
- Overrides:
equalsDeep
in classDomainResource
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equalsShallow
- Overrides:
equalsShallow
in classDomainResource
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isEmpty
- Specified by:
isEmpty
in interfaceorg.hl7.fhir.instance.model.api.IBase
- Overrides:
isEmpty
in classDomainResource
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getResourceType
- Specified by:
getResourceType
in classResource
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